PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Itr_sc000802.1_g00002.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 140aa    MW: 15878.2 Da    PI: 11.2447
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Itr_sc000802.1_g00002.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP244.92.9e-143883354
                      AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54
                              kG+r +k +g+WvAeIrd      ++r +lg++ t+  Aa+a++    +l 
  Itr_sc000802.1_g00002.1 38 NKGIRMRK-WGKWVAEIRDT-----NTRLWLGSYYTPVAAARAYDVVLFYLC 83
                             59***999.**********5.....5*******************9887775 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003802.2E-253698IPR001471AP2/ERF domain
PROSITE profilePS5103218.7553792IPR001471AP2/ERF domain
SuperFamilySSF541714.51E-173893IPR016177DNA-binding domain
PRINTSPR003672.7E-63849IPR001471AP2/ERF domain
CDDcd000182.12E-203993No hitNo description
PfamPF008472.2E-83984IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.5E-243993IPR001471AP2/ERF domain
PRINTSPR003672.7E-65874IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    Send to blast
MNNKKLARTA GGGDGVGASR GGGAEKKKRR PKQKNLYNKG IRMRKWGKWV AEIRDTNTRL  60
WLGSYYTPVA AARAYDVVLF YLCGPRAKLN FPDCVVGDGH HRQLTPKEIQ NRATRVGYWV  120
DAIRRGLQGH RQLTQKEIQN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12529KKKRR
22530KKKRRP
32532KKKRRPKQ
42631KKRRPK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006339868.15e-36PREDICTED: ethylene-responsive transcription factor RAP2-10-like
SwissprotQ9FH943e-30ERF10_ARATH; Ethylene-responsive transcription factor ERF010
TrEMBLA0A0V0INJ85e-36A0A0V0INJ8_SOLCH; Putative ethylene-responsive transcription factor RAP2-10-like
TrEMBLM0ZXP85e-36M0ZXP8_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000102282e-35(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9432390
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67190.11e-31DREB and EAR motif protein 2